Selecting SNOMED code(s) for a segmented structure that has multiple modifiers

This is a question for David Clunie @dclunie, but this came up in the past, and instead of sending email I am posting this here, for the benefit of the community. I will try to remember to post such questions of general interest in the public forum going forward.

In one of the models we are using, we have a need to encode segmentation of the structure that has laterality but also has additional positional modifier - “lower lobe of left lung” (and of course other combinations of those modifiers).

In the past, for coding “lung”, we would specify laterality as a modifier code. But when I search for this structure in SNOMED, I seem to see only the codes that already include the modifiers (see below).

image

Should we use those pre-coordinated codes and part with our prior practice, or there is another way? Can this be clarified in the DICOM CIDs somehow? Currently, CID 6110 Lung Anatomy Finding or Feature only has the code for “Lobe of lung”.

DICOM Segmentation value multiplicity for the Segmented Property Type Modifier Code Sequence Attribute is 1, so we cannot have multiple modifiers to say “Left” and “Lower” at the same time (see Segmented Property Type Modifier Code Sequence Attribute – DICOM Standard Browser and C.8.20.2 Segmentation Image Module).

Truly unfortunate, ChatGPT is below mediocre in helping pick SNOMED codes (at least when I tried to get help): ChatGPT cannot help with SNOMED (yet?) - Google Docs. We need a customization “text2snomed”, to follow on the earlier “text2cohort” work!

If understand the question correctly, what is wrong with using 90572001 | Structure of lower lobe of lung (body structure) and a laterality modifier of left?

90572001 is used in several context groups in DICOM PS3.16.

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Nothing wrong, I just missed it! I only searched for “left lower lobe of lung” and failed to see that one.

Should that code be added to CID 6110 Lung Anatomy Finding or Feature?

We can go over various applications we are working on right now, and put together the list of codes that are missing in CID 7151 Segmentation Property Type and subordinate tables.

It is already in CID 6126 Location in Lung, which is not included in CID 7151 Segmentation Property Type, as well as CID 7155 Thoracic Segmentation Type. The latter should probably be refactored to include CID 6126 rather than duplicating the content. I will look into doing a CP.

See https://app.zenhub.com/workspaces/overall-project-workspace-5d39f406a4f118000112b4bb/issues/gh/imagingdatacommons/idc-projectmanagement/1630